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| File: | e83608 |
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| ISBN: | 978-989-758-802-0 |
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| File: | s13326-025-00343-4 |
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| ISBN: | 978-1-64368-615-8 |
| File: | SHTI251394 |
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| File: | SHTI251396 |
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| ISBN: | 978-1-64368-608-0 |
| File: | SHTI250796 |
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| ISBN: | 979-8-4007-1402-3 |
| File: | 3733155.3733207 |
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| ISBN: | 978-1-64368-596-0 |
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| ISBN: | 978-1-64368-596-0 |
| File: | SHTI250614 |
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| ISBN: | 978-1-64368-596-0 |
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| ISBN: | 978-1-64368-596-0 |
| File: | SHTI250271 |
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| ISBN: | 978-1-64368-592-2 |
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| File: | e67984 |
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| DOI: | 10.2196/71906 |
| File: | accepted |
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| File: | 20552076251344515 |
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Ulrich,
A Generic Transformation Approach for Complex Laboratory Data Using the Fast Healthcare Interoperability Resources Mapping Language: Method Development and Implementation, JMIR Medical Informatics , vol. 12, pp. e57569—e57569, Oct. 2024.
A Generic Transformation Approach for Complex Laboratory Data Using the Fast Healthcare Interoperability Resources Mapping Language: Method Development and Implementation, JMIR Medical Informatics , vol. 12, pp. e57569—e57569, Oct. 2024.
| DOI: | 10.2196/57569 |
| File: | e57569 |
Lorenz
Rosenau,
Julian
Gruendner,
Alexander
Kiel,
Thomas
Köhler,
Bastian
Schaffer, and
Raphael W
Majeed,
Bridging Data Models in Health Care With a Novel Intermediate Query Format for Feasibility Queries: Mixed Methods Study, JMIR Medical Informatics , vol. 12, pp. e58541--e58541, Oct. 2024.
Bridging Data Models in Health Care With a Novel Intermediate Query Format for Feasibility Queries: Mixed Methods Study, JMIR Medical Informatics , vol. 12, pp. e58541--e58541, Oct. 2024.
| DOI: | 10.2196/58541 |
| File: | e58541 |
Tessa
Ohlsen,
Viola
Hofer, and
Josef
Ingenerf,
VaPCE: Validation tool for postcoordinated SNOMED CT expressions, JMIR Medical Informatics , Oct. 2024.
VaPCE: Validation tool for postcoordinated SNOMED CT expressions, JMIR Medical Informatics , Oct. 2024.
| DOI: | 10.2196/67984 |
| File: | accepted |
Hannah
Schmidt,
Katja
Baust,
Gabriele
Calaminus,
Lisa
Hohls,
Katharina
Tetzner,
Nicole
Griech,
Henrike
Haugke,
Hannah
Baltus,
Susanne
Elsner,
Alexander
Katalinic,
Hera
Becker,
Chirine
Cytera,
Judith
Gebauer,
Ann-Kristin
Kock-Schoppenhauer,
Anke
Neumann,
Christian
Denzer,
Michael M.
Schündeln,
Jörg
Faber,
Conny
Sattler,
Michael C.
Frühwald,
Anja
Borgmann-Staudt,
Anke
Barnbrock,
Markus
Metzler,
Gabriele
Escherich,
Inke R.
König,
Ingo
Menrath, and
Thorsten
Langer,
Effectiveness of structured, multidisciplinary long-term care for pediatric cancer survivors: protocol of the multicenter, randomized-controlled AELKI study, Trials , vol. 25, no. 1, pp. 597, Sep. 2024.
Effectiveness of structured, multidisciplinary long-term care for pediatric cancer survivors: protocol of the multicenter, randomized-controlled AELKI study, Trials , vol. 25, no. 1, pp. 597, Sep. 2024.
| DOI: | 10.1186/s13063-024-08377-2 |
| File: | s13063-024-08377-2 |
Tessa
Ohlsen,
Josef
Ingenerf,
Andrea
Essenwanger, and
Cora
Drenkhahn,
PCEtoFHIR: Decomposition of Postcoordinated SNOMED CT Expressions for Storage as HL7 FHIR Resources, JMIR Medical Informatics , vol. 12, pp. e57853, Sep. 2024.
PCEtoFHIR: Decomposition of Postcoordinated SNOMED CT Expressions for Storage as HL7 FHIR Resources, JMIR Medical Informatics , vol. 12, pp. e57853, Sep. 2024.
| DOI: | 10.2196/57853 |
| File: | e57853 |
Cecilia
Engels,
Zdenka
Dudová,
Martin
Breu,
David
Croft,
Christoph
Dolch,
Petra
Duhm-Harbeck,
Lars
Ebert,
Cäcilia
Engels,
Christian
Knell,
Ann-Kristin
Kock-Schoppenhauer,
John
Linde,
Christian
Maier,
Michael
Neumann,
Matthias
Öfelein,
Matthias
Rambow,
Susanne
Sahr,
Florian
Stampe,
Deniz
Tas,
Hannes
Ulrich, and
Hans-Ulrich
Prokosch,
The sample locator: A federated search tool for biosamples and associated data in Europe using HL7 FHIR, Computers in Biology and Medicine , vol. 180, pp. 108941, Sep. 2024.
The sample locator: A federated search tool for biosamples and associated data in Europe using HL7 FHIR, Computers in Biology and Medicine , vol. 180, pp. 108941, Sep. 2024.
| DOI: | 10.1016/j.compbiomed.2024.108941 |
| File: | S0010482524010266 |
Davide
Saraceno,
Catherine
Chronaki,
Giorgio
Cangioli,
Anna-Liesa
Filbert,
Monica
Muraca,
Alessandra
Berti,
Rita
Rielli,
Nikos
Thomopulos,
Lisa
Knoerr,
Diana
Walz,
Anke
Neumann,
Andrea
Beccaria,
Anna
Aulicino,
Brigitte
Nicolas,
Giacomo
Cavalca,
Anne
Uyttebroeck,
Maria
Van Helvoirt,
Tom
Brié,
Erik
Vanden Meersch,
Ruth
Ladenstein,
Edit
Bardi,
Günter
Schreier,
Stefan
Beyer,
Markus
Müllner-Rieder,
María Teresa
Tormo Alcañiz,
Lucas
Cervero Beltran,
Jelena
Rascon,
Monika
Kapitančukė,
Justas
Trinkunas,
Eglė
Stukaitė-Ruibienė,
Paulius
Ragauskas,
Audronė
Ciesiūnienė,
Riccardo
Haupt, and
Desiree
Grabow,
Assessment of HL7 FHIR Interoperability Between EHR Systems and the Survivorship Passport v2.0 Platform to Generate Treatment Summaries for Childhood Cancer Survivors in Six Clinics: Preliminary Testing Results, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
Assessment of HL7 FHIR Interoperability Between EHR Systems and the Survivorship Passport v2.0 Platform to Generate Treatment Summaries for Childhood Cancer Survivors in Six Clinics: Preliminary Testing Results, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
| DOI: | 10.3233/SHTI240646 |
| ISBN: | 9781643685335 |
| File: | SHTI240646 |
Michael
Anywar,
Mário
Macedo,
Santiago
Pazmino,
Tobias
Bronsch,
Benjamin
Kinast,
Ann-Kristin
Kock-Schoppenhauer, and
Björn
Schreiweis,
Challenges and Lessons Learned in Mapping HL7 v2 Data to openEHR: Insights from UKSH Medical Data Integration Center, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
Challenges and Lessons Learned in Mapping HL7 v2 Data to openEHR: Insights from UKSH Medical Data Integration Center, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
| DOI: | 10.3233/SHTI240658 |
| ISBN: | 978-1-64368-533-5 |
| File: | SHTI240658 |
PanCareSurPass
Consortium,
Roberta
Gazzarata,
Michael
Strübin,
Catherine
Chronaki,
Giorgio
Cangioli,
Davide
Saraceno,
Günter
Schreier,
Stefan
Beyer,
Florian
Trauner,
Gerald
Gredinger,
Ruth
Ladenstein,
Ismay
Ae De Beijer,
Giacomo
Cavalca,
Justas
Trinkunas,
Lucas
Cervero Beltran,
Mark
Vanautgaerden,
Ann-Kristin
Kock-Schoppenhauer,
Anke
Neumann,
Monica
Muraca,
Anna-Liesa
Filbert,
Riccardo
Haupt, and
Desiree
Grabow,
Childhood Cancer Survivorship Passport Challenges in the European Health Data Space, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
Childhood Cancer Survivorship Passport Challenges in the European Health Data Space, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
| DOI: | 10.3233/SHTI240651 |
| ISBN: | 978-1-64368-533-5 |
| File: | SHTI240651 |
Torge
Ablaß,
Friedrich
Simon,
Christina
Schwitlick,
Denise
Olbrich,
Kristina
Brandt,
Ina
Hohensee,
Nikolas
Von Bubnoff,
Claudia
Baldus,
Josef
Ingenerf,
Björn
Schreiweis, and
Ann-Kristin
Kock-Schoppenhauer,
Development, Involvement and Use of an Overarching In-House Registry for Clinical Trials, in Studies in Health Technology and Informatics , Röhrig, Rainer and Grabe, Niels and Hübner, Ursula Hertha and Jung, Klaus and Sax, Ulrich and Schmidt, Carsten Oliver and Sedlmayr, Martin and Zapf, Antonia, Eds. IOS Press, Aug.2024.
Development, Involvement and Use of an Overarching In-House Registry for Clinical Trials, in Studies in Health Technology and Informatics , Röhrig, Rainer and Grabe, Niels and Hübner, Ursula Hertha and Jung, Klaus and Sax, Ulrich and Schmidt, Carsten Oliver and Sedlmayr, Martin and Zapf, Antonia, Eds. IOS Press, Aug.2024.
| DOI: | 10.3233/SHTI240846 |
| ISBN: | 978-1-64368-536-6 |
| File: | SHTI240846 |
Jan
Schladetzky,
Niklas
Reimer,
Herwig
Nicolaus,
Hauke
Busch,
Björn
Schreiweis, and
Ann-Kristin
Kock-Schoppenhauer,
Integration of Oncological Data into openEHR: A Path Towards Improved Cancer Care and Research, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
Integration of Oncological Data into openEHR: A Path Towards Improved Cancer Care and Research, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
| DOI: | 10.3233/SHTI240655 |
| ISBN: | 978-1-64368-533-5 |
| File: | SHTI240655 |
Friedrich
Simon,
Jan
Schladetzky,
Stefanie
Macke,
Torge
Ablaß,
Josef
Ingenerf, and
Ann-Kristin
Kock-Schoppenhauer,
Metadata Driven Integration of Clinical Data for Secondary Use in FHIR – A Pilot Study at the UKSH, in Studies in Health Technology and Informatics , Röhrig, Rainer and Grabe, Niels and Hübner, Ursula Hertha and Jung, Klaus and Sax, Ulrich and Schmidt, Carsten Oliver and Sedlmayr, Martin and Zapf, Antonia, Eds. IOS Press, Aug.2024.
Metadata Driven Integration of Clinical Data for Secondary Use in FHIR – A Pilot Study at the UKSH, in Studies in Health Technology and Informatics , Röhrig, Rainer and Grabe, Niels and Hübner, Ursula Hertha and Jung, Klaus and Sax, Ulrich and Schmidt, Carsten Oliver and Sedlmayr, Martin and Zapf, Antonia, Eds. IOS Press, Aug.2024.
| DOI: | 10.3233/SHTI240850 |
| ISBN: | 978-1-64368-536-6 |
| File: | SHTI240850 |
Tessa
Ohlsen,
Joshua
Wiedekopf, and
Josef
Ingenerf,
Reformatted Crosswalk-Tables Between Annual ICD-10-Versions for Cross Version Data Analysis, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
Reformatted Crosswalk-Tables Between Annual ICD-10-Versions for Cross Version Data Analysis, in Studies in Health Technology and Informatics , Mantas, John and Hasman, Arie and Demiris, George and Saranto, Kaija and Marschollek, Michael and Arvanitis, Theodoros N. and Ognjanović, Ivana and Benis, Arriel and Gallos, Parisis and Zoulias, Emmanouil and Andrikopoulou, Elisavet, Eds. IOS Press, Aug.2024.
| DOI: | 10.3233/SHTI240652 |
| ISBN: | 978-1-64368-533-5 |
| File: | SHTI240652 |
Ronja
Schappert,
Julius
Verrel,
Nele Sophie
Brügge,
Frédéric
Li,
Theresa
Paulus,
Leonie
Becker,
Tobias
Bäumer,
Christian
Beste,
Veit
Roessner,
Sebastian
Fudickar, and
Alexander
Münchau,
Automated Video‐Based Approach for the Diagnosis of Tourette Syndrome, Movement Disorders Clinical Practice , Jul. 2024.
Automated Video‐Based Approach for the Diagnosis of Tourette Syndrome, Movement Disorders Clinical Practice , Jul. 2024.
| DOI: | 10.1002/mdc3.14158 |
| File: | mdc3.14158 |
Sabrina H.
Schröder,
Christian
Seitzer,
Navid
Tabriz,
Heinrich
Töpfer,
Jan-Marek
Meyer,
Sebastian
Fudickar,
Dirk
Weyhe, and
Verena
Uslar,
Requirements for the Acceptance of an App for Voice Therapy—A Usability Report Based on the “Oldenburger Logopädie App” (OLA), Journal of Voice , Jul. 2024.
Requirements for the Acceptance of an App for Voice Therapy—A Usability Report Based on the “Oldenburger Logopädie App” (OLA), Journal of Voice , Jul. 2024.
| DOI: | 10.1016/j.jvoice.2024.06.015 |
| File: | j.jvoice.2024.06.015 |
Lorenz
Rosenau,
Paul
Behrend,
Joshua
Wiedekopf,
Julian
Gruendner, and
Josef
Ingenerf,
Uncovering Harmonization Potential in Health Care Data Through Iterative Refinement of Fast Healthcare Interoperability Resources Profiles Based on Retrospective Discrepancy Analysis: Case Study, JMIR Medical Informatics , vol. 12, pp. e57005, Jul. 2024.
Uncovering Harmonization Potential in Health Care Data Through Iterative Refinement of Fast Healthcare Interoperability Resources Profiles Based on Retrospective Discrepancy Analysis: Case Study, JMIR Medical Informatics , vol. 12, pp. e57005, Jul. 2024.
| DOI: | 10.2196/57005 |
| File: | e57005 |
Danny
Ammon,
Maximilian
Kurscheidt,
Karoline
Buckow,
Toralf
Kirsten,
Matthias
Löbe,
Frank
Meineke,
Fabian
Prasser,
Julian
Sass,
Ulrich
Sax,
Sebastian
Stäubert,
Sylvia
Thun,
Reto
Wettstein,
Joshua P.
Wiedekopf,
Judith A. H.
Wodke,
Martin
Boeker, and
Thomas
Ganslandt,
Arbeitsgruppe Interoperabilität: Kerndatensatz und Informationssysteme für Integration und Austausch von Daten in der Medizininformatik-Initiative, Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz , vol. 67, no. 6, pp. 656—667, Jun. 2024.
Arbeitsgruppe Interoperabilität: Kerndatensatz und Informationssysteme für Integration und Austausch von Daten in der Medizininformatik-Initiative, Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz , vol. 67, no. 6, pp. 656—667, Jun. 2024.
| DOI: | 10.1007/s00103-024-03888-4 |
Hayder R.
Al-Omairi,
Arkan
AL-Zubaidi,
Sebastian
Fudickar,
Andreas
Hein, and
Jochem W.
Rieger,
Hammerstein–Wiener Motion Artifact Correction for Functional Near-Infrared Spectroscopy: A Novel Inertial Measurement Unit-Based Technique, Sensors , vol. 24, no. 10, pp. 3173, May 2024.
Hammerstein–Wiener Motion Artifact Correction for Functional Near-Infrared Spectroscopy: A Novel Inertial Measurement Unit-Based Technique, Sensors , vol. 24, no. 10, pp. 3173, May 2024.
| DOI: | 10.3390/s24103173 |
| File: | s24103173 |
Julia
Von Grundherr,
Simon
Elmers,
Barbara
Koch,
Lesley-Ann
Hail,
Julia
Mann,
Gabriele
Escherich,
Corinna
Bergelt,
Luisa
Samland,
Wiebke
Jensen,
Eik
Vettorazzi,
Maria
Stark,
Luzia
Valentini,
Freerk T.
Baumann,
Susanne
Singer,
Rüdiger
Reer,
Ronja
Beller,
Gabriele
Calaminus,
Jörg
Faber,
Carl Friedrich
Classen,
Judith
Gebauer,
Inken
Hilgendorf,
Michael
Koehler,
Alexander
Puzik,
Nicole
Salzmann,
Annette
Sander,
Lisa
Schiffmann,
Magdalena
Sokalska-Duhme,
Sonja
Schuster,
Ann-Kristin
Kock-Schoppenhauer,
Carsten
Bokemeyer,
Marianne
Sinn,
Alexander
Stein,
Sarah
Dwinger, and
Jannike
Salchow,
A Multimodal Lifestyle Psychosocial Survivorship Program in Young Cancer Survivors: The CARE for CAYA Program—A Randomized Clinical Trial Embedded in a Longitudinal Cohort Study, JAMA Network Open , vol. 7, no. 3, pp. e242375, Mar. 2024.
A Multimodal Lifestyle Psychosocial Survivorship Program in Young Cancer Survivors: The CARE for CAYA Program—A Randomized Clinical Trial Embedded in a Longitudinal Cohort Study, JAMA Network Open , vol. 7, no. 3, pp. e242375, Mar. 2024.
| DOI: | 10.1001/jamanetworkopen.2024.2375 |
| File: | 2816738 |
Jesse
Kruse,
Joshua
Wiedekopf,
Ann-Kristin
Kock-Schoppenhauer,
Andrea
Essenwanger,
Josef
Ingenerf, and
Hannes
Ulrich,
FML2Mirth: Generic Transformation of complex laboratory data based on FML mapping rules and automatically generated Mirth channels (Preprint), JMIR Medical Informatics , Feb. 2024.
FML2Mirth: Generic Transformation of complex laboratory data based on FML mapping rules and automatically generated Mirth channels (Preprint), JMIR Medical Informatics , Feb. 2024.
| DOI: | 10.2196/57569 |
| File: | accepted |
Roland
Stenger,
Rica
Schulze,
Sebastian
Löns,
Tobias
Bäumer, and
Sebastian
Fudickar,
Android App for Symptomatic Monitoring of Cervical Dystonia: Design and Usability Study, in Proceedings of the 17th {International} {Joint} {Conference} on {Biomedical} {Engineering} {Systems} and {Technologies} , SCITEPRESS - Science and Technology Publications, 2024.
Android App for Symptomatic Monitoring of Cervical Dystonia: Design and Usability Study, in Proceedings of the 17th {International} {Joint} {Conference} on {Biomedical} {Engineering} {Systems} and {Technologies} , SCITEPRESS - Science and Technology Publications, 2024.
| DOI: | 10.5220/0012465300003657 |
| File: | 0012465300003657 |
[de]
Björn
Schreiweis,
Hannes
Ulrich,
Heike
Lehmann,
Ann-Kristin
Kock-Schoppenhauer,
Benjamin
Kinast, and
Björn
Bergh,
Die Wissensmanagementplattform für Versorgung und Forschung am Universitätsklinikum Schleswig-Holstein – Ein Praxisbeispiel, in Health Data Management , Henke, Viola and Hülsken, Gregor and Schneider, Henning and Varghese, Julian, Eds. Wiesbaden: Springer Fachmedien Wiesbaden, 2024, pp. 689--701.
Die Wissensmanagementplattform für Versorgung und Forschung am Universitätsklinikum Schleswig-Holstein – Ein Praxisbeispiel, in Health Data Management , Henke, Viola and Hülsken, Gregor and Schneider, Henning and Varghese, Julian, Eds. Wiesbaden: Springer Fachmedien Wiesbaden, 2024, pp. 689--701.
| DOI: | 10.1007/978-3-658-43236-2_58 |
| ISBN: | 978-3-658-43235-5 978-3-658-43236-2 |
| File: | 978-3-658-43236-2_58 |
Gabriela
Ciortuz,
Hawzhin
Hozhabr Pour, and
Sebastian
Fudickar,
Evaluating Movement and Device-Specific DeepConvLSTM Performance in Wearable-Based Human Activity Recognition, in Proceedings of the 17th International Joint Conference on Biomedical Engineering Systems and Technologies , SciTePress, 2024. pp. 746--753.
Evaluating Movement and Device-Specific DeepConvLSTM Performance in Wearable-Based Human Activity Recognition, in Proceedings of the 17th International Joint Conference on Biomedical Engineering Systems and Technologies , SciTePress, 2024. pp. 746--753.
| DOI: | 10.5220/0012471300003657 |
| ISBN: | 978-989-758-688-0 |
| File: | 0012471300003657 |
Roland
Stenger,
Steffen
Busse,
Jonas
Sander,
Thomas
Eisenbarth, and
Sebastian
Fudickar,
Evaluating the Impact of Face Anonymization Methods on Computer Vision Tasks: A Trade-off Between Privacy and Utility, IEEE Access , pp. 1--1, 2024.
Evaluating the Impact of Face Anonymization Methods on Computer Vision Tasks: A Trade-off Between Privacy and Utility, IEEE Access , pp. 1--1, 2024.
| DOI: | 10.1109/access.2024.3519441 |
| File: | ACCESS.2024.3519441 |
Herwig
Nicolaus,
Michael
Anywar,
Santiago
Pazmino Pinto,
Hannes
Ulrich,
Jan
Schladetzky,
Ann-Kristin
Kock-Schoppenhauer, and
Josef
Ingenerf,
Integration of the Oncologic Base Data Set into the UKSH Medical Data Integration Center, in Student Conference 2024, Medical Engineering Science, Medical Informatics, Biomedical Engineering and Auditory Technology , Lübeck: Infinite Science Publishing, 2024.
Integration of the Oncologic Base Data Set into the UKSH Medical Data Integration Center, in Student Conference 2024, Medical Engineering Science, Medical Informatics, Biomedical Engineering and Auditory Technology , Lübeck: Infinite Science Publishing, 2024.
Gabriela
Ciortuz,
Joshua
Wiedekopf, and
Sebastian
Fudickar,
Integration von Wearables und Nutzung von digitalen Biomarkern zur Diagnostik und Therapie im Gesundheitswesen, in Health {Data} {Management} , Henke, Viola and Hülsken, Gregor and Schneider, Henning and Varghese, Julian, Eds. Wiesbaden: Springer Fachmedien Wiesbaden, 2024, pp. 323--336.
Integration von Wearables und Nutzung von digitalen Biomarkern zur Diagnostik und Therapie im Gesundheitswesen, in Health {Data} {Management} , Henke, Viola and Hülsken, Gregor and Schneider, Henning and Varghese, Julian, Eds. Wiesbaden: Springer Fachmedien Wiesbaden, 2024, pp. 323--336.
| DOI: | 10.1007/978-3-658-43236-2_31 |
| ISBN: | 9783658432362 |
| File: | 978-3-658-43236-2_31 |
Sebastian
Fudickar,
Carsten
Bantel,
Jannik
Spieker,
Heinrich
Töpfer,
Patrick
Stegeman,
Henrica
Schiphorst-Preuper,
Michiel
Reneman,
André
Wolff, and
Remko
Soer,
Natural Language Processing of Referral Letters for Machine Learning–Based Triaging of Patients With Low Back Pain to the Most Appropriate Intervention: Retrospective Study, Journal of Medical Internet Research , vol. 26, Jan. 2024.
Natural Language Processing of Referral Letters for Machine Learning–Based Triaging of Patients With Low Back Pain to the Most Appropriate Intervention: Retrospective Study, Journal of Medical Internet Research , vol. 26, Jan. 2024.
| DOI: | 10.2196/46857 |
| File: | 46857 |
Lorenz
Rosenau, and
Josef
Ingenerf,
Structured Queries to AQL: Querying OpenEHR Data Leveraging a FHIR-Based Infrastructure for Federated Feasibility Queries, in MEDINFO 2023 — The Future Is Accessible , IOS Press, 2024, pp. 33--37.
Structured Queries to AQL: Querying OpenEHR Data Leveraging a FHIR-Based Infrastructure for Federated Feasibility Queries, in MEDINFO 2023 — The Future Is Accessible , IOS Press, 2024, pp. 33--37.
| DOI: | 10.3233/SHTI230922 |
| File: | SHTI230922 |
Maximilian
Kurscheidt,
Joshua
Wiedekopf,
Julian
Gruendner,
Lucas
Triefenbach,
Simon Tobias
Schweizer,
Julian
Sass,
Reto
Wettstein,
Hauke
Hund,
Bettina
Uliczka,
Christian
Fegeler, and
Lorenz
Rosenau,
Trust and Uniformity through FHIR Validation: A Proposal for Establishing Guarantees in Cross-Institutional Healthcare Data Exchange, Gesundheit – gemeinsam. Kooperationstagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie (GMDS), Deutschen Gesellschaft für Sozialmedizin und Prävention (DGSMP), Deutschen Gesellschaft für Epidemiologie (DGEpi), Deuts , 2024. German Medical Science GMS Publishing House.
Trust and Uniformity through FHIR Validation: A Proposal for Establishing Guarantees in Cross-Institutional Healthcare Data Exchange, Gesundheit – gemeinsam. Kooperationstagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie (GMDS), Deutschen Gesellschaft für Sozialmedizin und Prävention (DGSMP), Deutschen Gesellschaft für Epidemiologie (DGEpi), Deuts , 2024. German Medical Science GMS Publishing House.
| DOI: | 10.3205/24GMDS011 |
| File: | 24gmds011.shtml |
2023
Ismay A. E.
De Beijer,
Roderick
Skinner,
Andrea
Beccaria,
Patricia
McColgan,
Ramona
Tallone,
Leontien C. M.
Kremer,
Helena J. H.
Van Der Pal,
Renée L.
Mulder,
{on
PanCareSurPass consortium},
Dorothea
Niehoff,
Diana
Walz,
Friederike
Erdmann,
Claudia
Spix,
Simone
Lightwood,
Francesca
Bagnasco,
Giacomo
Cavalca,
Sara
Oberti,
Brigitte
Nicolas,
Ruth
Ladenstein,
Vanessa
Düster,
Maria
Van Helvoirt,
Jurgen
Lemiere,
Marleen
Renard,
An
Michiels,
Ann-Kristin
Kock-Schoppenhauer,
Lea
Hildebrand,
Anke Neumann Anne-Katrin
Jahnke,
Justas
Trinkunas,
Audronė
Ciesiūnienė,
Paulius
Ragauskas,
Julia Balaguer
Guill,
Maria Teresa Tormo
Alcañiz,
Antonio Orduña
Galan,
Marisa Correcher
Palau,
Lucas Cervero
Beltrán,
Vicente Pons
Tamarit,
Davide
Saraceno,
Alessandra
Berti,
Carlo
Contino,
Nikos
Thomopulos,
Giulia
Stabile,
Maria Franca
Tomassi,
Igor
Zamberlan,
Barbara
Nichel,
Günter
Schreier,
Dieter
Hayn,
Karl
Kreiner,
Stefan
Beyer,
Catherine
Chronaki,
Giorgio
Cangioli,
Eliana
Charalambous,
Alexander
Degelsegger-Márquez,
Gerald
Gredinger,
Kathrin
Trunner,
Florian
Trauner,
Anja
Laschkolnig,
Leontien
Kremer,
Saskia
Pluijm,
Selina
Van Den Oever,
Ismay
De Beijer,
Jessica
Trollip,
Emma
Hardijzer,
Jaap Den
Hartogh,
Jeroen Te
Dorsthorst,
William
Sciberras, and
Carina
Schneider,
European recommendations for short-term surveillance of health problems in childhood, adolescent and young adult cancer survivors from the end of treatment to 5 years after diagnosis: a PanCare guideline, Journal of Cancer Survivorship , Dec. 2023.
European recommendations for short-term surveillance of health problems in childhood, adolescent and young adult cancer survivors from the end of treatment to 5 years after diagnosis: a PanCare guideline, Journal of Cancer Survivorship , Dec. 2023.
| DOI: | 10.1007/s11764-023-01493-z |
| File: | s11764-023-01493-z |
Christopher
Renner,
Niklas
Reimer,
Jan
Christoph,
Hauke
Busch,
Patrick
Metzger,
Melanie
Boerries,
Arsenij
Ustjanzew,
Dominik
Boehm, and
Philipp
Unberath,
Extending cBioPortal for Therapy Recommendation Documentation in Molecular Tumor Boards: Development and Usability Study, JMIR Medical Informatics , vol. 11, pp. e50017, Dec. 2023.
Extending cBioPortal for Therapy Recommendation Documentation in Molecular Tumor Boards: Development and Usability Study, JMIR Medical Informatics , vol. 11, pp. e50017, Dec. 2023.
| DOI: | 10.2196/50017 |
| File: | e50017 |
Jonas
Bienzeisler,
Ariadna
Perez-Garriga,
Lea C.
Brandl,
Ann-Kristin
Kock-Schoppenhauer,
Yasmin
Hollenbenders,
Maximilian
Kurscheidt, and
Christina
Schüttler,
Report from the 68th GMDS Annual Meeting: Science. Close to People, Methods of Information in Medicine , vol. 62, no. 05/06, pp. 202--205, Dec. 2023.
Report from the 68th GMDS Annual Meeting: Science. Close to People, Methods of Information in Medicine , vol. 62, no. 05/06, pp. 202--205, Dec. 2023.
| DOI: | 10.1055/s-0043-1777733 |
| File: | DOI |
Jan
Schladetzky,
Ann-Kristin
Kock-Schoppenhauer,
Cora
Drenkhahn,
Josef
Ingenerf, and
Joshua
Wiedekopf,
Mettertron – Bridging Metadata Repositories and Terminology Servers, Studies in Health Technology and Informatics , Sep. 2023.
Mettertron – Bridging Metadata Repositories and Terminology Servers, Studies in Health Technology and Informatics , Sep. 2023.
| DOI: | 10.3233/SHTI230721 |
| File: | SHTI230721 |
Hanno M.
Witte,
Jörg
Riedl,
Axel
Künstner,
Anke
Fähnrich,
Julius
Ketzer,
Stephanie M. J.
Fliedner,
Niklas
Reimer,
Veronica
Bernard,
Nikolas
Von Bubnoff,
Hartmut
Merz,
Hauke
Busch,
Alfred
Feller, and
Niklas
Gebauer,
Molecularly Stratified Treatment Options in Primary Refractory DLBCL/HGBL with MYC and BCL2 or BCL6 Rearrangements (HGBL, NOS with MYC/BCL6), Targeted Oncology , vol. 18, no. 5, pp. 749--765, Sep. 2023.
Molecularly Stratified Treatment Options in Primary Refractory DLBCL/HGBL with MYC and BCL2 or BCL6 Rearrangements (HGBL, NOS with MYC/BCL6), Targeted Oncology , vol. 18, no. 5, pp. 749--765, Sep. 2023.
| DOI: | 10.1007/s11523-023-00983-5 |
| File: | s11523-023-00983-5 |
Christian
Lins,
Erik
Berwald,
Andreas
Klausen,
Andreas
Hein, and
Sebastian
Fudickar,
EA-based smartwatch application for training and assistance in cardiopulmonary resuscitation, in Proceedings of the Companion Conference on Genetic and Evolutionary Computation , ACM, Jul.2023.
EA-based smartwatch application for training and assistance in cardiopulmonary resuscitation, in Proceedings of the Companion Conference on Genetic and Evolutionary Computation , ACM, Jul.2023.
| DOI: | 10.1145/3583133.3590752 |
| File: | 3583133.3590752 |
Madelaine
Sleimann,
Magdalena
Balcerek,
Chirine
Cytera,
Franziska
Richter,
Anja
Borgmann-Staudt,
Bernhard
Wörmann,
Lea Louisa
Kronziel,
Gabriele
Calaminus,
Ann-Kristin
Kock-Schoppenhauer,
Desiree
Grabow,
Katja
Baust,
Anke
Neumann,
Thorsten
Langer, and
Judith
Gebauer,
Implementation of a clinical long-term follow-up database for adult childhood cancer survivors in Germany: a feasibility study at two specialised late effects clinics, Journal of Cancer Research and Clinical Oncology , Jul. 2023.
Implementation of a clinical long-term follow-up database for adult childhood cancer survivors in Germany: a feasibility study at two specialised late effects clinics, Journal of Cancer Research and Clinical Oncology , Jul. 2023.
| DOI: | 10.1007/s00432-023-05145-8 |
| File: | s00432-023-05145-8 |
| Bibtex: | @article{sleimann_implementation_2023,
title = {Implementation of a clinical long-term follow-up database for adult childhood cancer survivors in {Germany}: a feasibility study at two specialised late effects clinics},
issn = {1432-1335},
shorttitle = {Implementation of a clinical long-term follow-up database for adult childhood cancer survivors in {Germany}},
url = {https://doi.org/10.1007/s00432-023-05145-8},
doi = {10.1007/s00432-023-05145-8},
abstract = {Childhood cancer survivors (CCS) are at risk for increased morbidity and reduced quality of life associated with treatment-related late effects. In Germany, however, only a few of the more than 40,000 CCS registered in the German Childhood Cancer Registry (GCCR) currently benefit from adequate clinical long-term follow-up (LTFU) structures. To establish a comprehensive knowledge base on CCS’ long-term health in Germany, a database was developed in cooperation with the GCCR. Following a first evaluation phase at two German university centres, this database will be implemented more widely within Germany allowing longitudinal documentation of clinical LTFU data.},
language = {en},
urldate = {2023-07-18},
journal = {Journal of Cancer Research and Clinical Oncology},
author = {Sleimann, Madelaine and Balcerek, Magdalena and Cytera, Chirine and Richter, Franziska and Borgmann-Staudt, Anja and Wörmann, Bernhard and Kronziel, Lea Louisa and Calaminus, Gabriele and Kock-Schoppenhauer, Ann-Kristin and Grabow, Desiree and Baust, Katja and Neumann, Anke and Langer, Thorsten and Gebauer, Judith},
month = jul,
year = {2023},
keywords = {Childhood cancer survivors, Epidemiology, Health, Late effects, Long-term follow-up, Quality of life},
}
|
Patrick
Metzger,
Maria Elena
Hess,
Andreas
Blaumeiser,
Thomas
Pauli,
Vincent
Schipperges,
Ralf
Mertes,
Jan
Christoph,
Philipp
Unberath,
Niklas
Reimer,
Raphael
Scheible,
Anna L.
Illert,
Hauke
Busch,
Geoffroy
Andrieux, and
Melanie
Boerries,
MIRACUM-Pipe: An Adaptable Pipeline for Next-Generation Sequencing Analysis, Reporting, and Visualization for Clinical Decision Making, Cancers , vol. 15, no. 13, pp. 3456, Jul. 2023.
MIRACUM-Pipe: An Adaptable Pipeline for Next-Generation Sequencing Analysis, Reporting, and Visualization for Clinical Decision Making, Cancers , vol. 15, no. 13, pp. 3456, Jul. 2023.
| DOI: | 10.3390/cancers15133456 |
| File: | 3456 |
Nele Sophie
Brügge,
Gesine Marie
Sallandt,
Ronja
Schappert,
Frédéric
Li,
Alina
Siekmann,
Marcin
Grzegorzek,
Tobias
Bäumer,
Christian
Frings,
Christian
Beste,
Roland
Stenger,
Veit
Roessner,
Sebastian
Fudickar,
Heinz
Handels, and
Alexander
Münchau,
Automated Motor Tic Detection: A Machine Learning Approach, Movement Disorders , May 2023.
Automated Motor Tic Detection: A Machine Learning Approach, Movement Disorders , May 2023.
| DOI: | 10.1002/mds.29439 |
| File: | mds.29439 |
Alexander
Pauls,
Jürgen M.
Bauer,
Rebecca
Diekmann,
Sebastian
Fudickar,
Andreas
Hein,
Sandra
Hellmers,
Sandra
Lau,
Jochen
Meyer,
Kai
Holdt, and
Frauke
Koppelin,
Motivationsgründe und Vorstellungen über eine zukünftige Beteiligung älterer Menschen im Forschungs- und Entwicklungsprozess von Gesundheitstechnologien – eine Mixed Methods-Studie, Das Gesundheitswesen , vol. 85, no. 10, pp. 895--903, May 2023.
Motivationsgründe und Vorstellungen über eine zukünftige Beteiligung älterer Menschen im Forschungs- und Entwicklungsprozess von Gesundheitstechnologien – eine Mixed Methods-Studie, Das Gesundheitswesen , vol. 85, no. 10, pp. 895--903, May 2023.
| DOI: | 10.1055/a-2042-9629 |
| File: | a-2042-9629 |
Joshua
Wiedekopf,
Cora
Drenkhahn, and
Josef
Ingenerf,
Performance Benchmarking of FHIR Terminology Operations in ETL Jobs, in Studies in Health Technology and Informatics , Hägglund, Maria and Blusi, Madeleine and Bonacina, Stefano and Nilsson, Lina and Cort Madsen, Inge and Pelayo, Sylvia and Moen, Anne and Benis, Arriel and Lindsköld, Lars and Gallos, Parisis, Eds. IOS Press, May2023.
Performance Benchmarking of FHIR Terminology Operations in ETL Jobs, in Studies in Health Technology and Informatics , Hägglund, Maria and Blusi, Madeleine and Bonacina, Stefano and Nilsson, Lina and Cort Madsen, Inge and Pelayo, Sylvia and Moen, Anne and Benis, Arriel and Lindsköld, Lars and Gallos, Parisis, Eds. IOS Press, May2023.
| DOI: | 10.3233/SHTI230244 |
| ISBN: | 978-1-64368-388-1 978-1-64368-389-8 |
| File: | SHTI230244 |
Hans-Ulrich
Prokosch,
Julian
Gruendner, and
Lorenz
Rosenau,
Towards a National Portal for Medical Research Data (FDPG): Vision, Status, and Lessons Learned, Studies in Health Technology and Informatics , vol. 302, pp. 307--311, May 2023.
Towards a National Portal for Medical Research Data (FDPG): Vision, Status, and Lessons Learned, Studies in Health Technology and Informatics , vol. 302, pp. 307--311, May 2023.
| DOI: | 10.3233/SHTI230124 |
Cora
Drenkhahn,
Tessa
Ohlsen,
Joshua
Wiedekopf, and
Josef
Ingenerf,
WASP—A Web Application to Support Syntactically and Semantically Correct SNOMED CT Postcoordination, Applied Sciences , vol. 13, no. 10, pp. 6114, May 2023.
WASP—A Web Application to Support Syntactically and Semantically Correct SNOMED CT Postcoordination, Applied Sciences , vol. 13, no. 10, pp. 6114, May 2023.
| DOI: | 10.3390/app13106114 |
| File: | 6114 |
| Bibtex: | @article{drenkhahn_waspweb_2023,
title = {{WASP}—{A} {Web} {Application} to {Support} {Syntactically} and {Semantically} {Correct} {SNOMED} {CT} {Postcoordination}},
volume = {13},
issn = {2076-3417},
url = {https://www.mdpi.com/2076-3417/13/10/6114},
doi = {10.3390/app13106114},
abstract = {Expressive clinical terminologies are of utmost importance for achieving a semantically interoperable data exchange and reuse in healthcare. SNOMED CT, widely respected as the most comprehensive terminology in medicine, provides formal concept definitions based on description logic which not only allows for advanced querying of SNOMED-CT-coded data but also for flexibly augmenting its 350,000 concepts by allowing a controlled combination of these. This ability for postcoordination largely increases the expressivity of the terminology but correlates with an intrinsic complexity. Complicated by the current lack of tooling support, postcoordination is widely either ignored or applied in an error-prone way. To help facilitate the adoption of postcoordination, we implemented a web application that guides users through the creation of postcoordinated expressions (PCEs) while ensuring adherence to syntactic and semantic constraints. Our approach was largely facilitated by making use of the extensive SNOMED CT specifications as well as advanced HL7 FHIR Terminology Services. Qualitative evaluations confirmed the usability of the developed application and the correctness of the PCEs created with it.},
language = {en},
number = {10},
urldate = {2023-05-22},
journal = {Applied Sciences},
author = {Drenkhahn, Cora and Ohlsen, Tessa and Wiedekopf, Joshua and Ingenerf, Josef},
month = may,
year = {2023},
pages = {6114},
}
|
Hayder R.
Al-Omairi,
Sebastian
Fudickar,
Andreas
Hein, and
Jochem W.
Rieger,
Improved Motion Artifact Correction in fNIRS Data by Combining Wavelet and Correlation-Based Signal Improvement, Sensors , vol. 23, no. 8, pp. 3979, Apr. 2023.
Improved Motion Artifact Correction in fNIRS Data by Combining Wavelet and Correlation-Based Signal Improvement, Sensors , vol. 23, no. 8, pp. 3979, Apr. 2023.
| DOI: | 10.3390/s23083979 |
| File: | s23083979 |
Selina R.
Van Den Oever,
Ismay A. E.
De Beijer,
Leontien C. M.
Kremer,
Marie
Alfes,
Julia
Balaguer,
Adela Cañete
Nieto,
Tiago
Costa,
Alexander
Degelsegger,
Maria Teresa
Tormo,
Helena J. H.
Van Der Pal,
Saskia M. F.
Pluijm,
{on
PanCareSurPass consortium},
Dorothea
Niehoff,
Diana
Walz,
Friederike
Erdmann,
Claudia
Spix,
Simone
Lightwood,
Francesca
Bagnasco,
Giacomo
Cavalca,
Sara
Oberti,
Brigitte
Nicolas,
Jurgen
Lemiere,
Marleen
Renard,
An
Michiels,
Ann-Kristin
Kock-Schoppenhauer,
Lea
Hildebrand,
Anke
Neumann,
Anne-Katrin
Jahnke,
Audronė
Ciesiūnienė,
Paulius
Ragauskas,
Adela
Cañete Nieto,
Julia
Balaguer Guill,
María Teresa
Tormo Alcañiz,
Antonio Orduña
Galan,
Marisa
Correcher Palau,
Lucas Cervero
Beltrán,
Vicente
Pons Tamarit,
Davide
Saraceno,
Alessandra
Berti,
Carlo
Contino,
Nikos
Thomopulos,
Giulia
Stabile,
Maria Franca
Tomassi,
Igor
Zamberlan,
Barbara
Nichel,
Dieter
Hayn,
Karl
Kreiner,
Stefan
Beyer,
Alexander
Degelsegger-Márquez,
Florian
Trauner,
Leontien
Kremer,
Saskia
Pluijm,
Selina
Van Den Oever,
Ismay
De Beijer,
Emma
Hardijzer,
Jaap
Den Hartogh,
Jeroen
Te Dorsthorst,
Samira
Essiaf,
William
Sciberras,
Anita
Kienesberger, and
Carina
Schneider,
Barriers and facilitators to implementation of the interoperable Survivorship Passport (SurPass) v2.0 in 6 European countries: a PanCareSurPass online survey study, Journal of Cancer Survivorship , Feb. 2023.
Barriers and facilitators to implementation of the interoperable Survivorship Passport (SurPass) v2.0 in 6 European countries: a PanCareSurPass online survey study, Journal of Cancer Survivorship , Feb. 2023.
| DOI: | 10.1007/s11764-023-01335-y |
| File: | s11764-023-01335-y |
Christian
Lins,
Franziska
Quang,
Rica
Schulze,
Stefanie
Lins,
Andreas
Hein, and
Sebastian
Fudickar,
An Android App for Posture Analysis Using OWAS, in Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies - HEALTHINF, , SciTePress, 2023. pp. 307--313.
An Android App for Posture Analysis Using OWAS, in Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies - HEALTHINF, , SciTePress, 2023. pp. 307--313.
| DOI: | 10.5220/0011668300003414 |
| ISBN: | 978-989-758-631-6 |
Birte S.
Löffler,
Heiko I.
Stecher,
Arnd
Meiser,
Sebastian
Fudickar,
Andreas
Hein, and
Christoph S.
Herrmann,
Attempting to counteract vigilance decrement in older adults with brain stimulation, Frontiers in Neuroergonomics , vol. 4, 2023.
Attempting to counteract vigilance decrement in older adults with brain stimulation, Frontiers in Neuroergonomics , vol. 4, 2023.
| DOI: | 10.3389/fnrgo.2023.1201702 |
| File: | fnrgo.2023.1201702 |
Gabriela
Ciortuz,
Marcin
Grzegorzek, and
Sebastian
Fudickar,
Effects of Time-Series Data Pre-Processing on the Transformer-Based Classification of Activities from Smart Glasses, in Proceedings of the 8th International Workshop on Sensor-Based Activity Recognition and Artificial Intelligence , New York, NY, USA: Association for Computing Machinery, 2023.
Effects of Time-Series Data Pre-Processing on the Transformer-Based Classification of Activities from Smart Glasses, in Proceedings of the 8th International Workshop on Sensor-Based Activity Recognition and Artificial Intelligence , New York, NY, USA: Association for Computing Machinery, 2023.
| DOI: | 10.1145/3615834.3615858 |
| ISBN: | 9798400708169 |
| File: | 3615834.3615858 |
Roland
Stenger,
Sebastian
Löns,
Feline
Hamami,
Nele
Brügge,
Tobias
Bäumer, and
Sebastian
Fudickar,
Extended Head Pose Estimation on Synthesized Avatars for Determining the Severity of Cervical Dystonia, in Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies , SCITEPRESS - Science and Technology Publications, 2023.
Extended Head Pose Estimation on Synthesized Avatars for Determining the Severity of Cervical Dystonia, in Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies , SCITEPRESS - Science and Technology Publications, 2023.
| DOI: | 10.5220/0011677600003414 |
| File: | 0011677600003414 |
Hanno M.
Witte,
Anke
Fähnrich,
Axel
Künstner,
Jörg
Riedl,
Stephanie M. J.
Fliedner,
Niklas
Reimer,
Nadine
Hertel,
Nikolas
Bubnoff,
Veronica
Bernard,
Hartmut
Merz,
Hauke
Busch,
Alfred
Feller, and
Niklas
Gebauer,
Primary refractory plasmablastic lymphoma: A precision oncology approach, Frontiers in Oncology , vol. 13, 2023.
Primary refractory plasmablastic lymphoma: A precision oncology approach, Frontiers in Oncology , vol. 13, 2023.
| DOI: | 10.3389/fonc.2023.1129405 |
| File: | fonc.2023.1129405 |
Josef
Ingenerf, and
Cora
Drenkhahn,
Referenzterminologie SNOMED CT ⎼ Interlingua zur Gewährleistung semantischer Interoperabilität in der Medizin., .... 1 Springer Vieweg Wiesbaden, 2023.
Referenzterminologie SNOMED CT ⎼ Interlingua zur Gewährleistung semantischer Interoperabilität in der Medizin., .... 1 Springer Vieweg Wiesbaden, 2023.
| ISBN: | 978-3-658-35562-3 |
Josef
Ingenerf, and
Cora
Drenkhahn,
SNOMED CT: Nutzung im Kontext von Informationsmodellen, in Referenzterminologie SNOMED CT , Wiesbaden: Springer Fachmedien Wiesbaden, 2023, pp. 213--307.
SNOMED CT: Nutzung im Kontext von Informationsmodellen, in Referenzterminologie SNOMED CT , Wiesbaden: Springer Fachmedien Wiesbaden, 2023, pp. 213--307.
| DOI: | 10.1007/978-3-658-35562-3_5 |
| ISBN: | 978-3-658-35561-6 978-3-658-35562-3 |
| File: | 978-3-658-35562-3_5 |
2022
Sebastian Fudickar,
Approaching digital interventions for musculoskeletal rehabilitation, Journal of Back and Musculoskeletal Rehabilitation , vol. 35, no. 6, pp. 1169--1170, Nov. 2022.
Approaching digital interventions for musculoskeletal rehabilitation, Journal of Back and Musculoskeletal Rehabilitation , vol. 35, no. 6, pp. 1169--1170, Nov. 2022.
| DOI: | 10.3233/bmr-225004 |
| File: | bmr-225004 |
Jochen
Meyer,
Tiara
Ratz,
Alexander
Pauls,
Sandra
Hellmers,
Susanne
Boll,
Sebastian
Fudickar,
Andreas
Hein,
Jürgen M.
Bauer,
Frauke
Koppelin,
Sonia
Lippke,
Manuela
Peters,
Claudia R.
Pischke,
Claudia
Voelcker-Rehage,
Hajo
Zeeb, and
Sarah
Forberger,
Designing and applying technology for prevention—Lessons learned in AEQUIPA and its implications for future research and practice, Frontiers in Public Health , vol. 10, Oct. 2022.
Designing and applying technology for prevention—Lessons learned in AEQUIPA and its implications for future research and practice, Frontiers in Public Health , vol. 10, Oct. 2022.
| DOI: | 10.3389/fpubh.2022.832922 |
| File: | fpubh.2022.832922 |
Gabriela
Augustinov,
Muhammad Adeel
Nisar,
Frédéric
Li,
Amir
Tabatabaei,
Marcin
Grzegorzek,
Keywan
Sohrabi, and
Sebastian
Fudickar,
Transformer-Based Recognition of Activities of Daily Living from Wearable Sensor Data, in Proceedings of the 7th {International} {Workshop} on {Sensor}-based {Activity} {Recognition} and {Artificial} {Intelligence} , New York, NY, USA: ACM, Sep.2022.
Transformer-Based Recognition of Activities of Daily Living from Wearable Sensor Data, in Proceedings of the 7th {International} {Workshop} on {Sensor}-based {Activity} {Recognition} and {Artificial} {Intelligence} , New York, NY, USA: ACM, Sep.2022.
| DOI: | 10.1145/3558884.3558895 |
| ISBN: | 9781450396240 |
| File: | 3558884.3558895 |
[eng]
Joshua
Wiedekopf,
Hannes
Ulrich,
Cora
Drenkhahn,
Ann-Kristin
Kock-Schoppenhauer, and
Josef
Ingenerf,
TermiCron - Bridging the Gap Between FHIR Terminology Servers and Metadata Repositories, Studies in Health Technology and Informatics , vol. 290, pp. 71--75, Jun. 2022.
TermiCron - Bridging the Gap Between FHIR Terminology Servers and Metadata Repositories, Studies in Health Technology and Informatics , vol. 290, pp. 71--75, Jun. 2022.
| DOI: | 10.3233/SHTI220034 |
| File: | SHTI220034 |
| Bibtex: | @article{wiedekopf_termicron_2022,
title = {{TermiCron} - {Bridging} the {Gap} {Between} {FHIR} {Terminology} {Servers} and {Metadata} {Repositories}},
volume = {290},
issn = {1879-8365},
url = {https://doi.org/10.3233/SHTI220034},
doi = {10.3233/SHTI220034},
abstract = {The large variability of data models, specifications, and interpretations of data elements is particular to the healthcare domain. Achieving semantic interoperability is the first step to enable reuse of healthcare data. To ensure interoperability, metadata repositories (MDR) are increasingly used to manage data elements on a structural level, while terminology servers (TS) manage the ontologies, terminologies, coding systems and value sets on a semantic level. In practice, however, this strict separation is not always followed; instead, semantical information is stored and maintained directly in the MDR, as a link between both systems is missing. This may be reasonable up to a certain level of complexity, but it quickly reaches its limitations with increasing complexity. The goal of this approach is to combine both components in a compatible manner. We present TermiCron, a synchronization engine that provides synchronized value sets from TS in MDRs, including versioning and annotations. Prototypical results were shown for the terminology server Ontoserver and two established MDR systems. Bridging the semantic and structural gap between the two infrastructure components, this approach enables shared use of metadata and reuse of corresponding health information by establishing a clear separation of the two systems and thus serves to strengthen reuse as well as to increase quality.},
language = {eng},
journal = {Studies in Health Technology and Informatics},
author = {Wiedekopf, Joshua and Ulrich, Hannes and Drenkhahn, Cora and Kock-Schoppenhauer, Ann-Kristin and Ingenerf, Josef},
month = jun,
year = {2022},
pmid = {35672973},
keywords = {Delivery of Health Care, HL7 FHIR, Health Facilities, Metadata, Metadata Repository, Secondary Use, Semantics},
pages = {71--75},
} |
[eng]
Tessa
Ohlsen,
Valerie
Kruse,
Rosemarie
Krupar,
Alexandra
Banach,
Josef
Ingenerf, and
Cora
Drenkhahn,
Mapping of ICD-O Tuples to OncoTree Codes Using SNOMED CT Post-Coordination, Studies in Health Technology and Informatics , vol. 294, pp. 307--311, May 2022.
Mapping of ICD-O Tuples to OncoTree Codes Using SNOMED CT Post-Coordination, Studies in Health Technology and Informatics , vol. 294, pp. 307--311, May 2022.
| DOI: | 10.3233/SHTI220464 |
| File: | SHTI220464 |
| Bibtex: | @article{ohlsen_mapping_2022,
title = {Mapping of {ICD}-{O} {Tuples} to {OncoTree} {Codes} {Using} {SNOMED} {CT} {Post}-{Coordination}},
volume = {294},
issn = {1879-8365},
url = {https://doi.org/10.3233/SHTI220464},
doi = {10.3233/SHTI220464},
abstract = {Around 500,000 oncological diseases are diagnosed in Germany every year which are documented using the International Classification of Diseases for Oncology (ICD-O). Apart from this, another classification for oncology, OncoTree, is often used for the integration of new research findings in oncology. For this purpose, a semi-automatic mapping of ICD-O tuples to OncoTree codes was developed. The implementation uses a FHIR terminology server, pre-coordinated or post-coordinated SNOMED CT expressions, and subsumption testing. Various validations have been applied. The results were compared with reference data of scientific papers and manually evaluated by a senior pathologist, confirming the applicability of SNOMED CT in general and its post-coordinated expressions in particular as a viable intermediate mapping step. Resulting in an agreement of 84,00 \% between the newly developed approach and the manual mapping, it becomes obvious that the present approach has the potential to be used in everyday medical practice.},
language = {eng},
journal = {Studies in Health Technology and Informatics},
author = {Ohlsen, Tessa and Kruse, Valerie and Krupar, Rosemarie and Banach, Alexandra and Ingenerf, Josef and Drenkhahn, Cora},
month = may,
year = {2022},
pmid = {35612082},
keywords = {Germany, HL7 FHIR, ICD-O, International Classification of Diseases, Medical Oncology, OncoTree, Ontoserver, SNOMED CT, Systematized Nomenclature of Medicine, post-coordination, terminology server},
pages = {307--311},
}
|
[eng]
Joshua
Wiedekopf,
Cora
Drenkhahn,
Lorenz
Rosenau,
Hannes
Ulrich,
Ann-Kristin
Kock-Schoppenhauer, and
Josef
Ingenerf,
TerminoDiff - Detecting Semantic Differences in HL7 FHIR CodeSystems, Studies in Health Technology and Informatics , vol. 294, pp. 362--366, May 2022.
TerminoDiff - Detecting Semantic Differences in HL7 FHIR CodeSystems, Studies in Health Technology and Informatics , vol. 294, pp. 362--366, May 2022.
| DOI: | 10.3233/SHTI220475 |
| File: | SHTI220475 |
| Bibtex: | @article{wiedekopf_terminodiff_2022,
title = {{TerminoDiff} - {Detecting} {Semantic} {Differences} in {HL7} {FHIR} {CodeSystems}},
volume = {294},
issn = {1879-8365},
url = {https://doi.org/10.3233/SHTI220475},
doi = {10.3233/SHTI220475},
abstract = {While HL7 FHIR and its terminology package have seen a rapid uptake by the research community, in no small part due to the wide availability of tooling and resources, there are some areas where tool availability is still lacking. In particular, the comparison of terminological resources, which supports the work of terminologists and implementers alike, has not yet been sufficiently addressed. Hence, we present TerminoDiff, an application to semantically compare FHIR R4 CodeSystem resources. Our tool considers differences across all levels required, i.e. metadata and concept differences, as well as differences in the edge graph, and surfaces them in a visually digestible fashion.},
language = {eng},
journal = {Studies in Health Technology and Informatics},
author = {Wiedekopf, Joshua and Drenkhahn, Cora and Rosenau, Lorenz and Ulrich, Hannes and Kock-Schoppenhauer, Ann-Kristin and Ingenerf, Josef},
month = may,
year = {2022},
pmid = {35612097},
keywords = {Delivery of Health Care, Drug Packaging, Electronic Health Records, HL7 FHIR, Health Information Exchange, Health Level Seven, Metadata, Semantics, Terminology as Topic, Vocabulary},
pages = {362--366},
} |
[eng]
Julian
Gruendner,
Noemi
Deppenwiese,
Michael
Folz,
Thomas
Köhler,
Björn
Kroll,
Hans-Ulrich
Prokosch,
Lorenz
Rosenau,
Mathias
Rühle,
Marc-Anton
Scheidl,
Christina
Schüttler,
Brita
Sedlmayr,
Alexander
Twrdik,
Alexander
Kiel, and
Raphael W.
Majeed,
Architecture for a feasibility query portal for distributed COVID-19 Fast Healthcare Interoperability Resources (FHIR) patient data repositories: Design and Implementation Study, JMIR medical informatics , Apr. 2022.
Architecture for a feasibility query portal for distributed COVID-19 Fast Healthcare Interoperability Resources (FHIR) patient data repositories: Design and Implementation Study, JMIR medical informatics , Apr. 2022.
| DOI: | 10.2196/36709 |
| File: | 36709 |
| Bibtex: | @article{gruendner_architecture_2022,
title = {Architecture for a feasibility query portal for distributed {COVID}-19 {Fast} {Healthcare} {Interoperability} {Resources} ({FHIR}) patient data repositories: {Design} and {Implementation} {Study}},
issn = {2291-9694},
shorttitle = {Architecture for a feasibility query portal for distributed {COVID}-19 {Fast} {Healthcare} {Interoperability} {Resources} ({FHIR}) patient data repositories},
url = {https://doi.org/10.2196/36709},
doi = {10.2196/36709},
abstract = {BACKGROUND: An essential step in any medical research project after having identified the research question is to find out if there are enough patients available for a study and where to find them. Pursuing digital feasibility queries on available patient data registries has proven to be an excellent way of reusing existing real world data sources. To support multicentric research, these feasibility queries should be designed and implemented to run across multiple sites and securely access local data. Working across hospitals usually also means working with different data formats and vocabularies. Recently, the Fast Healthcare Interoperability Resources (FHIR) standard has been developed by HL7 to address this concern and describe patient data in a standardized format. The Medical Informatics Initiative (MII) in Germany has committed to this standard and created Data Integration Centers, which convert existing data into the FHIR format at each hospital. This partially solves the interoperability problem, however a distributed feasibility query platform for the FHIR standard is still missing.
OBJECTIVE: This study describes the design and implementation of the components involved in creating a cross-hospital feasibility query platform for researchers based on FHIR resources. This effort is part of a larger COVID-19 data exchange platform (CODEX) and is designed to be scalable for a broad range of patient data.
METHODS: We analyzed and designed the abstract components necessary for a distributed feasibility query. This included a user interface for creating the query, a backend with an ontology and terminology service, a middleware for query distribution and a FHIR feasibility query execution service.
RESULTS: We implemented the components identified in the methods. The resulting solution was distributed to 33 German university hospitals. The functionality of the comprehensive network infrastructure was demonstrated using a test dataset based on the German Corona Consensus Dataset (GECCO). A performance test using specifically created synthetic data revealed the applicability of our solution to datasets containing millions of FHIR resources. The solution can be easily deployed across the hospitals and supports feasibility queries, combining multiple inclusion and exclusion criteria using standard Health Level Seven (HL7) query languages such as the Clinical Quality Language (CQL) and FHIR Search. Developing a platform based on multiple microservices allowed us to create an extendable platform and support multiple HL7 query languages and middleware components to allow integration with future directions of the Medical Informatics Initiative.
CONCLUSIONS: We designed and implemented a feasibility platform for distributed feasibility queries, which works directly on FHIR formatted data and distributed it across 33 university hospitals in Germany. We showed that developing a feasibility platform directly on the FHIR standard is feasible.
CLINICALTRIAL:},
language = {eng},
journal = {JMIR medical informatics},
author = {Gruendner, Julian and Deppenwiese, Noemi and Folz, Michael and Köhler, Thomas and Kroll, Björn and Prokosch, Hans-Ulrich and Rosenau, Lorenz and Rühle, Mathias and Scheidl, Marc-Anton and Schüttler, Christina and Sedlmayr, Brita and Twrdik, Alexander and Kiel, Alexander and Majeed, Raphael W.},
month = apr,
year = {2022},
pmid = {35486893},
} |
[eng]
Lorenz
Rosenau,
Raphael W.
Majeed,
Josef
Ingenerf,
Alexander
Kiel,
Björn
Kroll,
Thomas
Köhler,
Hans-Ulrich
Prokosch, and
Julian
Gruendner,
Generation of a Fast Healthcare Interoperability Resources (FHIR)-based Ontology for Federated Feasibility Queries in the Context of COVID-19: Feasibility Study, JMIR medical informatics , vol. 10, no. 4, pp. e35789, Apr. 2022.
Generation of a Fast Healthcare Interoperability Resources (FHIR)-based Ontology for Federated Feasibility Queries in the Context of COVID-19: Feasibility Study, JMIR medical informatics , vol. 10, no. 4, pp. e35789, Apr. 2022.
| DOI: | 10.2196/35789 |
| File: | 35789 |
| Bibtex: | @article{rosenau_generation_2022,
title = {Generation of a {Fast} {Healthcare} {Interoperability} {Resources} ({FHIR})-based {Ontology} for {Federated} {Feasibility} {Queries} in the {Context} of {COVID}-19: {Feasibility} {Study}},
volume = {10},
issn = {2291-9694},
shorttitle = {Generation of a {Fast} {Healthcare} {Interoperability} {Resources} ({FHIR})-based {Ontology} for {Federated} {Feasibility} {Queries} in the {Context} of {COVID}-19},
url = {https://doi.org/10.2196/35789},
doi = {10.2196/35789},
abstract = {BACKGROUND: The COVID-19 pandemic highlighted the importance of making research data from all German hospitals available to scientists to respond to current and future pandemics promptly. The heterogeneous data originating from proprietary systems at hospitals' sites must be harmonized and accessible. The German Corona Consensus Dataset (GECCO) specifies how data for COVID-19 patients will be standardized in Fast Healthcare Interoperability Resources (FHIR) profiles across German hospitals. However, given the complexity of the FHIR standard, the data harmonization is not sufficient to make the data accessible. A simplified visual representation is needed to reduce the technical burden, while allowing feasibility queries.
OBJECTIVE: This study investigates how a search ontology can be automatically generated using FHIR profiles and a terminology server. Furthermore, it describes how this ontology can be used in a user interface (UI) and how a mapping and a terminology tree created together with the ontology can translate user input into FHIR queries.
METHODS: We used the FHIR profiles from the GECCO data set combined with a terminology server to generate an ontology and the required mapping files for the translation. We analyzed the profiles and identified search criteria for the visual representation. In this process, we reduced the complex profiles to code value pairs for improved usability. We enriched our ontology with the necessary information to display it in a UI. We also developed an intermediate query language to transform the queries from the UI to federated FHIR requests. Separation of concerns resulted in discrepancies between the criteria used in the intermediate query format and the target query language. Therefore, a mapping was created to reintroduce all information relevant for creating the query in its target language. Further, we generated a tree representation of the ontology hierarchy, which allows resolving child concepts in the process.
RESULTS: In the scope of this project, 82 (99\%) of 83 elements defined in the GECCO profile were successfully implemented. We verified our solution based on an independently developed test patient. A discrepancy between the test data and the criteria was found in 6 cases due to different versions used to generate the test data and the UI profiles, the support for specific code systems, and the evaluation of postcoordinated Systematized Nomenclature of Medicine (SNOMED) codes. Our results highlight the need for governance mechanisms for version changes, concept mapping between values from different code systems encoding the same concept, and support for different unit dimensions.
CONCLUSIONS: We developed an automatic process to generate ontology and mapping files for FHIR-formatted data. Our tests found that this process works for most of our chosen FHIR profile criteria. The process established here works directly with FHIR profiles and a terminology server, making it extendable to other FHIR profiles and demonstrating that automatic ontology generation on FHIR profiles is feasible.},
language = {eng},
number = {4},
journal = {JMIR medical informatics},
author = {Rosenau, Lorenz and Majeed, Raphael W. and Ingenerf, Josef and Kiel, Alexander and Kroll, Björn and Köhler, Thomas and Prokosch, Hans-Ulrich and Gruendner, Julian},
month = apr,
year = {2022},
pmid = {35380548},
pages = {e35789},
} |
[en]
Lorenz
Bastian,
Alina M.
Hartmann,
Thomas
Beder,
Sonja
Hänzelmann,
Jan
Kässens,
Miriam
Bultmann,
Marc P.
Hoeppner,
Sören
Franzenburg,
Michael
Wittig,
Andre
Franke,
Inga
Nagel,
Malte
Spielmann,
Niklas
Reimer,
Hauke
Busch,
Stefan
Schwartz,
Björn
Steffen,
Andreas
Viardot,
Konstanze
Döhner,
Mustafa
Kondakci,
Gerald
Wulf,
Knut
Wendelin,
Andrea
Renzelmann,
Alexander
Kiani,
Heiko
Trautmann,
Martin
Neumann,
Nicola
Gökbuget,
Monika
Brüggemann, and
Claudia D.
Baldus,
UBTF::ATXN7L3 gene fusion defines novel B cell precursor ALL subtype with CDX2 expression and need for intensified treatment, Leukemia , Apr. 2022.
UBTF::ATXN7L3 gene fusion defines novel B cell precursor ALL subtype with CDX2 expression and need for intensified treatment, Leukemia , Apr. 2022.
| DOI: | 10.1038/s41375-022-01557-6 |
| File: | s41375-022-01557-6 |
| Bibtex: | @article{bastian_ubtfatxn7l3_2022,
title = {{UBTF}::{ATXN7L3} gene fusion defines novel {B} cell precursor {ALL} subtype with {CDX2} expression and need for intensified treatment},
issn = {0887-6924, 1476-5551},
shorttitle = {{UBTF}},
url = {https://www.nature.com/articles/s41375-022-01557-6},
doi = {10.1038/s41375-022-01557-6},
language = {en},
urldate = {2022-04-12},
journal = {Leukemia},
author = {Bastian, Lorenz and Hartmann, Alina M. and Beder, Thomas and Hänzelmann, Sonja and Kässens, Jan and Bultmann, Miriam and Hoeppner, Marc P. and Franzenburg, Sören and Wittig, Michael and Franke, Andre and Nagel, Inga and Spielmann, Malte and Reimer, Niklas and Busch, Hauke and Schwartz, Stefan and Steffen, Björn and Viardot, Andreas and Döhner, Konstanze and Kondakci, Mustafa and Wulf, Gerald and Wendelin, Knut and Renzelmann, Andrea and Kiani, Alexander and Trautmann, Heiko and Neumann, Martin and Gökbuget, Nicola and Brüggemann, Monika and Baldus, Claudia D.},
month = apr,
year = {2022},
}
|
[en]
Philipp
Unberath,
Lukas
Mahlmeister,
Niklas
Reimer,
Hauke
Busch,
Melanie
Boerries, and
Jan
Christoph,
Searching of Clinical Trials Made Easier in cBioPortal Using Patients' Genetic and Clinical Profiles, Applied Clinical Informatics , vol. 13, no. 02, pp. 363--369, Mar. 2022.
Searching of Clinical Trials Made Easier in cBioPortal Using Patients' Genetic and Clinical Profiles, Applied Clinical Informatics , vol. 13, no. 02, pp. 363--369, Mar. 2022.
| DOI: | 10.1055/s-0042-1743560 |
| File: | DOI |
| Bibtex: | @article{unberath_searching_2022,
title = {Searching of {Clinical} {Trials} {Made} {Easier} in {cBioPortal} {Using} {Patients}' {Genetic} and {Clinical} {Profiles}},
volume = {13},
issn = {1869-0327},
url = {http://www.thieme-connect.de/DOI/DOI?10.1055/s-0042-1743560},
doi = {10.1055/s-0042-1743560},
abstract = {Abstract
Background Molecular tumor boards (MTBs) cope with the complexity of an increased usage of genome sequencing data in cancer treatment. As for most of these patients, guideline-based therapy options are exhausted, finding matching clinical trials is crucial. This search process is often performed manually and therefore time consuming and complex due to the heterogeneous and challenging dataset.
Objectives In this study, a prototype for a search tool was developed to demonstrate how cBioPortal as a clinical and genomic patient data source can be integrated with ClinicalTrials.gov, a database of clinical studies to simplify the search for trials based on genetic and clinical data of a patient. The design of this tool should rest on the specific needs of MTB participants and the architecture of the integration should be as lightweight as possible and should not require manual curation of trial data in advance with the goal of quickly and easily finding a matching study.
Methods Based on a requirements analysis, interviewing MTB experts, a prototype was developed. It was further refined using a user-centered development process with multiple feedback loops. Finally, the usability of the application was evaluated with user interviews including the thinking-aloud protocol and the system usability scale (SUS) questionnaire.
Results The integration of ClinicalTrials.gov in cBioPortal is achieved by a new tab in the patient view where the genomic profile for the search is prefilled and additional parameters can be adjusted. These parameters are then used to query the application programming interface (API) of ClinicalTrials.gov. The returned search results subsequently are ranked and presented to the user. The evaluation of the application resulted in an SUS score of 83.5.
Conclusion This work demonstrates the integration of cBioPortal with ClinicalTrials.gov to use clinical and genomic patient data to search for appropriate trials within an MTB.},
language = {en},
number = {02},
urldate = {2022-03-31},
journal = {Applied Clinical Informatics},
author = {Unberath, Philipp and Mahlmeister, Lukas and Reimer, Niklas and Busch, Hauke and Boerries, Melanie and Christoph, Jan},
month = mar,
year = {2022},
pages = {363--369},
} |
[en]
Kai
Vogl,
Josef
Ingenerf,
Jan
Kramer,
Christine
Chantraine, and
Cora
Drenkhahn,
LUMA: A Mapping Assistant for Standardizing the Units of LOINC-Coded Laboratory Tests, Applied Sciences , vol. 12, no. 12, pp. 5848, Jan. 2022.
LUMA: A Mapping Assistant for Standardizing the Units of LOINC-Coded Laboratory Tests, Applied Sciences , vol. 12, no. 12, pp. 5848, Jan. 2022.
| DOI: | 10.3390/app12125848 |
| File: | 5848 |
| Bibtex: | @article{vogl_luma_2022,
title = {{LUMA}: {A} {Mapping} {Assistant} for {Standardizing} the {Units} of {LOINC}-{Coded} {Laboratory} {Tests}},
volume = {12},
copyright = {http://creativecommons.org/licenses/by/3.0/},
issn = {2076-3417},
shorttitle = {{LUMA}},
url = {https://www.mdpi.com/2076-3417/12/12/5848},
doi = {10.3390/app12125848},
abstract = {The coding system Unified Code for Units of Measure (UCUM) serves the unambiguous electronic communication of physical quantities and their measurements and has faced a slow uptake. Despite being closely related to popular healthcare standards such as LOINC, laboratories still majorly report results using proprietary unit terms. Currently available methods helping users create mappings between their units and UCUM are not flexible and automated enough to be of great use in trying to remedy this. We propose the “LOINC to UCUM Mapping Assistant” (LUMA) as a tool able to overcome the drawbacks of existing approaches while being more accessible even to inexperienced users. By mapping LOINC’s Property axis to representations within UCUM reflecting its semantics, we were able to formalize the association between the two. An HL7 FHIR back-end provides LUMA with UCUM unit recommendations sourced from existing lookup tables simply by providing it with a LOINC code. Additionally, the mappings users created may be used to perform unit conversions from proprietary units to UCUM. The tool was evaluated with five participants from the LADR laboratory network in Germany, who valued the streamlined approach to creating the mappings and particularly emphasized the utility of being able to perform unit conversions within the tool.},
language = {en},
number = {12},
urldate = {2022-06-08},
journal = {Applied Sciences},
author = {Vogl, Kai and Ingenerf, Josef and Kramer, Jan and Chantraine, Christine and Drenkhahn, Cora},
month = jan,
year = {2022},
note = {Number: 12
Publisher: Multidisciplinary Digital Publishing Institute},
keywords = {HL7 FHIR, LOINC, RELMA, REST, UCUM, mapping, standardization},
pages = {5848},
} |
Anke
Neumann,
Ann-Kristin
Kock-Schoppenhauer,
Desiree
Grabow,
Diana
Walz,
Anna-Liesa
Filbert,
Thorsten
Langer, and
Josef
Ingenerf,
Mapping, modeling and standardization of clinical data into the HL7 FHIR specification for the EU project PanCareSurPass, in Student conference proceedings 2022 , Lübeck: Infinite Science Publishing / Infinite Science Publishing, 2022. pp. 273--276.
Mapping, modeling and standardization of clinical data into the HL7 FHIR specification for the EU project PanCareSurPass, in Student conference proceedings 2022 , Lübeck: Infinite Science Publishing / Infinite Science Publishing, 2022. pp. 273--276.
| ISBN: | 978-3-945954-67-6 |
Benjamin
Stahr,
Sebastian
Fudickar, and
Christian
Lins,
Mobile Applications for Self-management of Chronic Diseases: A Systematic Review, in Proceedings of the 15th {International} {Joint} {Conference} on {Biomedical} {Engineering} {Systems} and {Technologies} , SCITEPRESS - Science and Technology Publications, 2022.
Mobile Applications for Self-management of Chronic Diseases: A Systematic Review, in Proceedings of the 15th {International} {Joint} {Conference} on {Biomedical} {Engineering} {Systems} and {Technologies} , SCITEPRESS - Science and Technology Publications, 2022.
| File: | 0010846200003123 |
Hannes
Ulrich,
Hristina
Uzunova,
Heinz
Handels, and
Josef
Ingenerf,
Proposal of Semantic Annotation for German Metadata Using Bidirectional Recurrent Neural Networks, Challenges of Trustable AI and Added-Value on Health , pp. 357--361, 2022.
Proposal of Semantic Annotation for German Metadata Using Bidirectional Recurrent Neural Networks, Challenges of Trustable AI and Added-Value on Health , pp. 357--361, 2022.
| DOI: | 10.3233/SHTI220474 |
| File: | SHTI220474 |
| Bibtex: | @article{ulrich_proposal_2022,
title = {Proposal of {Semantic} {Annotation} for {German} {Metadata} {Using} {Bidirectional} {Recurrent} {Neural} {Networks}},
url = {https://ebooks.iospress.nl/doi/10.3233/SHTI220474},
doi = {10.3233/SHTI220474},
urldate = {2022-08-16},
journal = {Challenges of Trustable AI and Added-Value on Health},
author = {Ulrich, Hannes and Uzunova, Hristina and Handels, Heinz and Ingenerf, Josef},
year = {2022},
note = {Publisher: IOS Press},
pages = {357--361},
} |
Conrad Fifelski-von
Böhlen,
Anna
Brinkmann,
Sebastian
Fudickar,
Sandra
Hellmers, and
Andreas
Hein,
Technology-Based Education and Training System for Nursing Professionals, in Biomedical {Engineering} {Systems} and {Technologies} , Springer International Publishing, 2022, pp. 120--138.
Technology-Based Education and Training System for Nursing Professionals, in Biomedical {Engineering} {Systems} and {Technologies} , Springer International Publishing, 2022, pp. 120--138.
| DOI: | 10.1007/978-3-031-20664-1_7 |
| File: | 978-3-031-20664-1_7 |
[EN]
Hannes
Ulrich,
Ann-Kristin
Kock-Schoppenhauer,
Noemi
Deppenwiese,
Robert
Gött,
Jori
Kern,
Martin
Lablans,
Raphael W.
Majeed,
Mark R.
Stöhr,
Jürgen
Stausberg,
Julian
Varghese,
Martin
Dugas, and
Josef
Ingenerf,
Understanding the Nature of Metadata: Systematic Review, Journal of Medical Internet Research , vol. 24, no. 1, pp. e25440, Jan. 2022.
Understanding the Nature of Metadata: Systematic Review, Journal of Medical Internet Research , vol. 24, no. 1, pp. e25440, Jan. 2022.
| DOI: | 10.2196/25440 |
| File: | e25440 |
| Bibtex: | @article{ulrich_understanding_2022,
title = {Understanding the {Nature} of {Metadata}: {Systematic} {Review}},
volume = {24},
shorttitle = {Understanding the {Nature} of {Metadata}},
url = {https://www.jmir.org/2022/1/e25440},
doi = {10.2196/25440},
abstract = {Background: Metadata are created to describe the corresponding data in a detailed and unambiguous way and is used for various applications in different research areas, for example, data identification and classification. However, a clear definition of metadata is crucial for further use. Unfortunately, extensive experience with the processing and management of metadata has shown that the term “metadata” and its use is not always unambiguous.
Objective: This study aimed to understand the definition of metadata and the challenges resulting from metadata reuse.
Methods: A systematic literature search was performed in this study following the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines for reporting on systematic reviews. Five research questions were identified to streamline the review process, addressing metadata characteristics, metadata standards, use cases, and problems encountered. This review was preceded by a harmonization process to achieve a general understanding of the terms used.
Results: The harmonization process resulted in a clear set of definitions for metadata processing focusing on data integration. The following literature review was conducted by 10 reviewers with different backgrounds and using the harmonized definitions. This study included 81 peer-reviewed papers from the last decade after applying various filtering steps to identify the most relevant papers. The 5 research questions could be answered, resulting in a broad overview of the standards, use cases, problems, and corresponding solutions for the application of metadata in different research areas.
Conclusions: Metadata can be a powerful tool for identifying, describing, and processing information, but its meaningful creation is costly and challenging. This review process uncovered many standards, use cases, problems, and solutions for dealing with metadata. The presented harmonized definitions and the new schema have the potential to improve the classification and generation of metadata by creating a shared understanding of metadata and its context.},
language = {EN},
number = {1},
urldate = {2022-01-12},
journal = {Journal of Medical Internet Research},
author = {Ulrich, Hannes and Kock-Schoppenhauer, Ann-Kristin and Deppenwiese, Noemi and Gött, Robert and Kern, Jori and Lablans, Martin and Majeed, Raphael W. and Stöhr, Mark R. and Stausberg, Jürgen and Varghese, Julian and Dugas, Martin and Ingenerf, Josef},
month = jan,
year = {2022},
note = {Company: Journal of Medical Internet Research
Distributor: Journal of Medical Internet Research
Institution: Journal of Medical Internet Research
Label: Journal of Medical Internet Research
Publisher: JMIR Publications Inc., Toronto, Canada},
keywords = {Humans, Metadata, Publications, Reference Standards, data classification, data identification, data integration, metadata, metadata definition, systematic review},
pages = {e25440},
} |
2021
S. Fudickar C. Lins,
An evolutionary approach to continuously estimate CPR quality parameters from a wrist-worn inertial sensor, Health and Technology , vol. 12, no. 1, pp. 161--173, Dec. 2021.
An evolutionary approach to continuously estimate CPR quality parameters from a wrist-worn inertial sensor, Health and Technology , vol. 12, no. 1, pp. 161--173, Dec. 2021.
| DOI: | 10.1007/s12553-021-00618-7 |
| File: | s12553-021-00618-7 |
Niklas
Reimer,
Philipp
Unberath,
Hauke
Busch,
Melanie
Börries,
Patrick
Metzger,
Arsenij
Ustjanzew,
Christopher
Renner,
Hans-Ulrich
Prokosch, and
Jan
Christoph,
Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform, in Studies in {Health} {Technology} and {Informatics} , IOS Press, Nov.2021.
Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform, in Studies in {Health} {Technology} and {Informatics} , IOS Press, Nov.2021.
| DOI: | 10.3233/SHTI210169 |
| ISBN: | 978-1-64368-236-5 978-1-64368-237-2 |
| File: | SHTI210833 |
[engl]
Alexandra
Banach,
Hannes
Ulrich,
Björn
Kroll,
Alexander
Kiel,
Josef
Ingenerf, and
Ann-Kristin
Kock-Schoppenhauer,
Benefits of MII Core Dataset and HL7 FHIR-Based Tooling for Automated Recruiting Purposes, Kiel: German Medical Science GMS Publishing House, Sep.2021. pp. DocAbstr. 125.
Benefits of MII Core Dataset and HL7 FHIR-Based Tooling for Automated Recruiting Purposes, Kiel: German Medical Science GMS Publishing House, Sep.2021. pp. DocAbstr. 125.
| DOI: | 10.3205/21gmds027 |
| Bibtex: | @inproceedings{banach_benefits_2021,
address = {Kiel},
title = {Benefits of {MII} {Core} {Dataset} and {HL7} {FHIR}-{Based} {Tooling} for {Automated} {Recruiting} {Purposes}},
copyright = {This is an Open Access article distributed under the terms of the Creative Commons Attribution 4.0 License.},
doi = {10.3205/21gmds027},
language = {engl},
publisher = {German Medical Science GMS Publishing House},
author = {Banach, Alexandra and Ulrich, Hannes and Kroll, Björn and Kiel, Alexander and Ingenerf, Josef and Kock-Schoppenhauer, Ann-Kristin},
month = sep,
year = {2021},
keywords = {CQL, FHIR, NLP, clinical trials, patient recruitment},
pages = {DocAbstr. 125},
} |
[eng]
Hannes
Ulrich,
Paul
Behrend,
Joshua
Wiedekopf,
Cora
Drenkhahn,
Ann-Kristin
Kock-Schoppenhauer, and
Josef
Ingenerf,
Hands on the Medical Informatics Initiative Core Data Set - Lessons Learned from Converting the MIMIC-IV, Studies in Health Technology and Informatics , vol. 283, pp. 119--126, Sep. 2021.
Hands on the Medical Informatics Initiative Core Data Set - Lessons Learned from Converting the MIMIC-IV, Studies in Health Technology and Informatics , vol. 283, pp. 119--126, Sep. 2021.
| DOI: | 10.3233/SHTI210549 |
| Bibtex: | @article{ulrich_hands_2021,
title = {Hands on the {Medical} {Informatics} {Initiative} {Core} {Data} {Set} - {Lessons} {Learned} from {Converting} the {MIMIC}-{IV}},
volume = {283},
issn = {1879-8365},
doi = {10.3233/SHTI210549},
abstract = {With the steady increase in the connectivity of the healthcare system, new requirements and challenges are emerging. In addition to the seamless exchange of data between service providers on a national level, the local legacy data must also meet the new requirements. For this purpose, the applications used must be tested securely and sufficiently. However, the availability of suitable and realistic test data is not always given. Therefore, this study deals with the creation of test data based on real electronic health record data provided by the Medical Information Mart for Intensive Care (MIMIC-IV) database. In addition to converting the data to the current FHIR R4, conversion to the core data sets of the German Medical Informatics Initiative was also presented and made available. The test data was generated to simulate a legacy data transfer. Moreover, four different FHIR servers were tested for performance. This study is the first step toward comparable test scenarios around shared datasets and promotes comparability among providers on a national level.},
language = {eng},
journal = {Studies in Health Technology and Informatics},
author = {Ulrich, Hannes and Behrend, Paul and Wiedekopf, Joshua and Drenkhahn, Cora and Kock-Schoppenhauer, Ann-Kristin and Ingenerf, Josef},
month = sep,
year = {2021},
pmid = {34545827},
keywords = {Data Integration, Delivery of Health Care, Electronic Health Records, HL7 FHIR, Information Dissemination, MIMIC-IV, Medical Informatics},
pages = {119--126},
}
|

